Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGIDKIGFATSQYVLEMTDLAIARQVDPEKFSKGLLLDSLSITPVTEDIVTLAASAANDILS--DEDKETIDMVIVATESSIDQSKAASVYVHQLLEIQPFARSFEMKEACYSATAALDYAKLHVEKHPDSKVLVIASDIAKYGIK---STGESTQGAGSIAMLISQNPSILELKEDRLAQTR-DIMDFWRPNYSDVPYVNGMFSTKQYLDMLKTTWKEYQKRFNTSLSDYAAFCFHIPFPKLALKGFNKILDNNLDEQKKAELQENFEHSITYSKKIGNCYTGSLYLGLLSLLENSQNLKAGDQIAFFSYGSGAVAEIFTGQLVDGYQNKLQSDRMDQLNKRQKITVTEYEKLFFEKTILDENGNANFNTYRTGTFSLDSICEHQRIYKKINN |
2EBD Chain:A ((1-309)) | MGTKIIGTGVYLPKNVLTNFDLEKIVDTSDEWITTRTGIKERRIAK-EETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAK-GVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEAVDWEDRSTCVLFGDGAGAVVVTRSEDKSDIL-ATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNIP----------KEKVFV---NIQKYGNTSAASIPIALHEAIKEG-KVKRGDLILMTAMGGGLTWGAVLLRY---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172034 for 2852 contacts (-60.3/contact) +
2D Compatibility (PS) -32216 + (NN) -14652 + (LL) 5592
1D Compatibility (HY) -6000 + (ID) 2650
Total energy: -221960.0 ( -77.83 by residue)
QMean score : 0.449
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