Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRASGVLMHITSLPGDLGIGTFGREAYAFVDFLVETDQKFWQILPLTTTSFGDSPYQSFSAVAGNTHLIDFDLLTLEGFISKDDYQNISFGQDPEVVDYAGLFEKRRPVLEKAVKNFLQEERATRMLSDFLQEEKWVTDFAEFMAIKEHFGNKALQEWDDKAIIRREEEALAGYRQKLSEVIKYHEVTQYFFYKQWFELKEYANDKGIQIIGDMPIYVSADSVEVWTMPELFKLDRDKQPLAIAGVPADDFSDDGQLWGNPIYNWDYHKESDFDWWIYRIQSGVKMYDYLRIDHFKGFSDYWEIRGDYQTANDGSWQPAPGPELFATIKEKLG-DLPIIAENLGYIDERAERLLAGTGFPGMKIMEFGFYDTTGNSIDIPHNYTENTIAYA-GTHDNEVINGWFENLTVEQKAYAENYMRRLPNE-PITETVLRTLYATVSQTTITCMQDLLDKPADSRMNMPNTVGGNWQWRMRKEDLTENRKAFLKEITTIYNRGNK--- |
| 3ES5 Chain:A ((42-420)) | MRL--------------------------GWIDPLPQVDTIFPLGLEPNVESIP----------AGEVEL-DFN---LPETIAKPFADTVTSVGDRI-----QLVDDDKENIATSIYGLSFFKAARQLYSTMLDHEKAVNQPLKAVYY------------DETPIPAHMSGALG-------------------------------------IIGHMKTKVG--DVLVKDAGVLFKRGTAAGVTKFSEIDND-----------KTWNLDCSK------LVWADHSSLSMIKRLASEKISQL-----VKQRYRVTD------AQGHVYSVSMPQLTDQALPDYYDSIPDVAPNSDQLRVLTAALQMSLAQFR-NDELPHDEDRSDLLTTLDLLYADGAYEISALRDQFELLMARYTTDFKWRVESIFKVGPPPAGTTGYGAQTVSSTGNTARWQFPLSDADINIGYLFSPSKSFSLFPKMVGYSKRAREDASASFANSDAKKFYAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ES5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20760 for 2841 contacts (-7.3/contact) +
2D Compatibility (PS) -38927 + (NN) -3486 + (LL) 7164
1D Compatibility (HY) -8000 + (ID) 3500
Total energy: -67509.0 ( -23.76 by residue)
QMean score : 0.136
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