Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATYETFAAVYDAVMDDTLYDKWTDFSLRHFPKGKKKLLELACGTGIQSVRFSQAGYAVTGLDLSGDMLKLAKKRATSAHQSIQFIEGNMLDLSNV-GKYDLITCYSDSICYMQDEVEVGDVFIEVYKALEENGVFIFDVHSTYQTDKVFPGYSYHENADDFAMVWDTYEDDAPHSIVHELTFFVQEEDGRFTRHDEVHEERTYDILTYDILLEQAGFKDVKVYADFEDKKPTATSARWFFVAHK |
3CGG Chain:A ((46-194)) | ---------------------------------RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFP----EARWVVGDLSVDQISETDFDLIVSAG-NVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR----------------------------------------------------------GWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CGG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88022 for 1176 contacts (-74.8/contact) +
2D Compatibility (PS) -15404 + (NN) -3049 + (LL) 6364
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -104661.0 ( -89.00 by residue)
QMean score : 0.504
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