Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MKKITKMVISSVLATVLMTACSQSSQNGQSDVKHIGILQYVEHPS--LTATRKGFIKELAKEGYKDGKNIKIEYKNAQGDQSNIQSISEKLIKD--NKLVLGIATPAAQSLTTVSTETPILFTAVTDPVSAELVKSMKKPEGLATGTSDMSPIKKQVSLLRKVMPKVKRVGIMYTTSERNSEVQVKQAKKIFQEAG---IKTSVKGISSTNDVQDTAKSLMSKT---EVIFVPTDNIIASSVTLLGNLSKELKVPVVG------GSADMVPSGLLFSYGADYEALGRQTARQAVKILKGKDVAKVPSEYPQNLKVVVNEDMAKELGIDVSS-IKNNK |
| 1JX6 Chain:A ((4-341)) | GYWGYQEFLDEFPEQRNLTNALSEAVRAQPVPLSKPTQRPIKISVVYPGQQVSDYWVRNIASFEKRLYKLNIN--YQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNITTPVREWDKHQPF-LYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKATKQSGYDAAKASLAKHPDVDFIYACSTDVALGAVDALAELGRE-DIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMAEAIKWDLEDK---PVPTVYSGDFEIVTKADSPERIEALKKRAFRYSD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JX6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13581 for 2600 contacts (-5.2/contact) +
2D Compatibility (PS) -33732 + (NN) -12249 + (LL) 16
1D Compatibility (HY) -2000 + (ID) 2000
Total energy: -63546.0 ( -24.44 by residue)
QMean score : 0.331
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