Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MGFTDETVRFRLDDSNKVEISETLTAVYR-SLEEKGYNPINQIVGYVLSGDPAYV--PRYNDARNQIRKYERDEIVEELVRYYLQGNGIDL------
2CBL Chain:A ((218-305))
THPGYMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLG----QWAIGYVTADGNILQTIPHNKPLFQALIDGFREG-------FYLFPDGRNQNPDLTG
General information:
TITO was launched using:
RESULT:
Template:
2CBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4157 for 488 contacts (-8.5/contact) +
2D Compatibility (PS) -8448 + (NN) -2569 + (LL) 1148
1D Compatibility (HY) -800 + (ID) 650
Total energy: -15476.0 ( -31.71 by residue)
QMean score : 0.184
(partial model without unconserved sides chains):
PDB file :
Tito_2CBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CBL-query.scw
PDB file :
Tito_Scwrl_2CBL.pdb
: