Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDTKHLIASEIQKVVPDMEQSTILSLLETPKNSSMGDLAFPAFSLAKTLRKAPQIIASDIAEQIKSDQFEKVEAVGPYVNFFLDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLANIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAE-------TDPSVDEEAREWFRKLEANDPEATELWQWFRDESLLEFNRLYDQMNVTFDSYNGEA--FYNDKMDEVLELLESKNLLVES-KGAQVVNLEKYGI-EHPALIKKSDGATLYITRDLAAALYRKRTYD-FAKSIYVVGNEQSAHFKQLKAVLKEMD-YDWSDDMTHVPFGLVTKGGAKLSTRKGNVILLEPTVAEAINRAASQIEAKNPN---LADKDKVAQAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGPYVQYAHARIQSILRKANFNPSNSDNYSLNDVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYAHTRILDEDAEISSRLALCYATATVLKESLRLLGVDAPNEM |
1F7U Chain:A ((136-483)) | --------------------------------------------------------------------------------------------------------SCKLVENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERYGNEEALVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQVSK-ESMLKAIDLFKEKGLTHEDK-GAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKY-HFDKMIYVIASQQDLHAAQFFEILKQMGF-EWAKDLQHVNFGMVQ----GMSTRKGTVVFLDNILEETKEKMHEVMKKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGPYLQYAHSRLRSVERNASGITQEKWINADFSLLKEPAAKLLIRLLGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYDVLWVAGQTEELATARLALYGAARQVLYNGMRLLGLT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1F7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129304 for 2520 contacts (-51.3/contact) +
2D Compatibility (PS) -35900 + (NN) -16602 + (LL) 7944
1D Compatibility (HY) -32400 + (ID) 6800
Total energy: -213062.0 ( -84.55 by residue)
QMean score : 0.547
|
|
|