Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVEGVSLHLIKNQQFKTNHLTFRFSGDFNNKTVARRSLVAQMLVTANAKYPKVQEFREKLASLY--------GASLSTKISTKGLVHIVDIDIVFVKNTFTLEQENIVEQIITFLEDMLFSPLISLEQYQTSIFDTEKKNLIQYLEADIEDNFYSSDLALKSLFYNNKTLRLPKYGTASLVESENSFTAYQEFQKMLKEDQLDIFVVGDFDDYRMIQAFNRM---AFEPRHKVLAFDYTQTYENITRSQVEDKDVNQSIMQLAYHLPITYKDEDYFALIVFNGLFGAF---------AHSLLFTEIREKQGLAYTIGSQFDSF--TGLFTIYAGIDKENRERFLKLINKQFNNIKMGRFSSTLLKQTKDILKMNYVLASDNPKVIVDHIYHEHYL-DQFHTSALFIDKVDDVTKSDIVSVATK-LKLQAFYFLEGN---------- |
| 1BGY Chain:B ((21-439)) | ---PQ----------DLEFTRLPNGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDV-DILMEFLLNVTTAP-----EFRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAY-RNALANSLYCPDYRIGKVTPVELHDYVQNHFTSARMALIG-LGVSHPVLKQVAEQFLNIRGG-----LGLSGAKAKYHGGEIREQN-GDSLVHAALVAESA-AIGSAEANAFSVLQHVLGAGPHVKRGSNA-TSSLYQAVAKGVHQPFDVSAFNASYSDSGLFGFYTISQAASAGDVIKAAYNQVKTIAQGNLSNPDVQAAKNKLKAGYLMSVESSEGFLDEVGSQALAAGSYTPPSTVLQQIDAVADADVINAAKKFVSGRKSMAASGNLGHTPFIDEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144891 for 3174 contacts (-45.6/contact) +
2D Compatibility (PS) -40298 + (NN) -8382 + (LL) 2780
1D Compatibility (HY) -2800 + (ID) 2300
Total energy: -195891.0 ( -61.72 by residue)
QMean score : 0.360
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