Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELKHLPKYKHITEHAETYANIDAGSLELFLSLFDISKKMNHVMEHYFAGRGLSEGKFKILMLLFDAKDHRLSPTELAKRSNVTKATITGLLDGLARDGFVSRRHHTEDKRKISIELTTEGKARLEQFLPGHFSKISAVMENYSDEEKDMFVKMLGDLFERLSVFKD
3CJN Chain:A ((15-160))-----------------RELAEIGLEGYAPYLMNRIMGRYNANLRKEMTALGLSTAKMRALAILSAK--DGLPIGTLGIFAVVEQSTLSRALDGLQADGLVRREVD--DQRSSRVYLTPAGRAVYDRLWPHMRASHDRMFQGITPQERQAFLATLNKMLANIRVH--


General information:
TITO was launched using:
RESULT:

Template: 3CJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 432 -61539 -142.45 -427.35
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -142.45
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_3CJN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CJN-query.scw
PDB file : Tito_Scwrl_3CJN.pdb: