Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKKQCVAMLLAGGKGSRLSGLTKNMAKPAVSFGGKYRIIDFTLSNCSNSGIDTVGILTQYQ-PLELNSYIGIGSAWDLDRYNGGVTVLPPYAESSEVKWYKGTASSIYENLNYLNQYDPEYVLILSGDHIYK-MDYGKMLDYHIEKKADVTISVIEVGWEEASRFGIMKANPDGTITHFDEKPKFPKSNLASMGIYIFNWPLLKQYLEMDDQNPYSSHDFGKDIIPLLLEEKKKLSAYPF--KGYWKDVGTVQSLWEANMDLLKEDSELKLFERKWKIYSVNPNQPPQFISSDAQVQDSLVNEGCVVYGNVSHSVLFQGVTVGKHTTVTSSVIMPDVTIGEHVVIENAIVPNGMVLPDGAVIRSEKDIEEVLLVSEEFVEKELI 1LVW Chain:A ((1-244)) -GAHMKGIVLAGGSGTRLYPITRAVSKQLLPIYDK-PMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGDGSQFGV-----RFSYRV--Q-----EEPRGIADAFIVGKDFIG---DSKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYVRD--PRPFGVVEFDSEGRVISIEEKPSRPKSNYVVPGLYFYDNQVVEIA-RRIEP-SDRGELEITSVNEEYLRMG-KLRVELMGRGMAWLDTGTHDGLLEASSFIETIQ----------------------------------------------------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 1LVW.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1297 -51684 -39.85 -215.35 target 2D structure prediction score : 0.61 Monomeric hydrophicity matching model chain A : 0.63 3D Compatibility (PKB) : -39.85 2D Compatibility (Sec. Struct. Predict.) : 0.61 1D Compatibility (Hydrophobicity) : 0.63 QMean score : 0.436

(partial model without unconserved sides chains): PDB file : Tito_1LVW.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1LVW-query.scw PDB file : Tito_Scwrl_1LVW.pdb: