Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITRMSELFLRTLRDDPADAEVASHKLLIRAGYIRP--VAPGLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPALLPRAPYE-TTNRWTQYGDSVFRLKDR----RGNDYLLGPTHEELFTLTVKGEYSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFV-MKDSYSFDIDAAGLKAAYHAHREAYQRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARPDTLPIDGLPEAVVHDTGDTPTIASLVAWANEADLGRTVTAADTLKNVLIKVRQPGGDTELLAIGVPGDREVDDKRLGAALEPADYALLDDDDFAKHPFLVKGYIGPKALRENNVRYLVDPRIVDGTSWITGADQPGRHVVGLVAGRDFTADGTIEAAEVREGDPSPDGAGPLVMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDELGLRWPSTVAPFDVHLVIANKDA---QARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAELLGMPWIVVVGR-GWADGVVELRDRFSGQTRELVAGASLATDIAAAVTG |
| 1NJ1 Chain:A ((44-411)) | -----------------------FHNILEEAEIIDQRYPVKGMHVWMPHGFMIRKNTLKILRRILD-RDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKEFFNSLGIPYLITRRPP--------W-----------------------D------------------KF------------------------------------------------------PGSE----------------------------------Y----------TV--A--------------------FDTL---------------------MP-------DGKTLQIGTVHNLGQTFARTFEIKFETPEGDHEYVHQTCYGLS-DRVIASVIAIHGDESGLCLPPDVAAHQVVIVPIIFKKAAEEVMEACRELRSRLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEK-VTADLQGIEETLREL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173470 for 2876 contacts (-60.3/contact) +
2D Compatibility (PS) -38728 + (NN) -18571 + (LL) 12340
1D Compatibility (HY) -20000 + (ID) 4100
Total energy: -242529.0 ( -84.33 by residue)
QMean score : 0.428
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