Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSPPKIRRYIPADRDATLAIWLEASRVGH--GFLGEAELQKQKALVRDHYLDASETWLALDGDTPLGFIGLLD--------AFIGGLFVAPTAHGRGIGRQLVEHAATLK-----GALEVEVYAANREALGFYARCGFVESGRRPRDDEGRALEIVQLRREH
2GE3 Chain:A ((6-150))
--DTVTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVIGWCDIRRQDRATRAHCGTLGMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFAHEGRARDAVSIDGHYIDSLNMAI
General information:
TITO was launched using:
RESULT:
Template:
2GE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49650 for 871 contacts (-57.0/contact) +
2D Compatibility (PS) -14463 + (NN) -9047 + (LL) 180
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -80680.0 ( -92.63 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_2GE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GE3-query.scw
PDB file :
Tito_Scwrl_2GE3.pdb
: