Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC
1JLT Chain:A ((1-122))
--------------------NLFQFGDMILQKTGKEAVHSYAIYGCYCGWGGQARAQDATDRCCFAQDCCYGRV--NDCNPKTATYTYSFENGDIVCGDNDLCLRAVCECDRAAAICLGENVNTYDKNYEYYSISHCTEESEQC
General information:
TITO was launched using:
RESULT:
Template:
1JLT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43571 for 951 contacts (-45.8/contact) +
2D Compatibility (PS) -13154 + (NN) -8577 + (LL) 2596
1D Compatibility (HY) -12400 + (ID) 2900
Total energy: -78006.0 ( -82.03 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_1JLT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JLT-query.scw
PDB file :
Tito_Scwrl_1JLT.pdb
: