Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
4EPT Chain:A ((2-167))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKSDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4EPT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103386 for 1329 contacts (-77.8/contact) +
2D Compatibility (PS) -18564 + (NN) -9187 + (LL) 1972
1D Compatibility (HY) -22000 + (ID) 8050
Total energy: -159215.0 ( -119.80 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_4EPT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EPT-query.scw
PDB file :
Tito_Scwrl_4EPT.pdb
: