Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLLPLPLLLFLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLK-PGSDTLQEVKLRLMDPQACS-HFRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGR-SDA--KPPAVFTRISHYRPWINQILQAN
2QXI Chain:A ((1-223))
---------------------IIDGAPCARGSHPWQVALLSG---N-QLHCGGVLVNERWVLTAAHCKMNEYTVHLGSDTLG--DRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSRC--EPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPLVCRGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMKKH
General information:
TITO was launched using:
RESULT:
Template:
2QXI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171426 for 1869 contacts (-91.7/contact) +
2D Compatibility (PS) -23270 + (NN) -4315 + (LL) 2160
1D Compatibility (HY) -15600 + (ID) 4200
Total energy: -216651.0 ( -115.92 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_2QXI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QXI-query.scw
PDB file :
Tito_Scwrl_2QXI.pdb
: