Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASKPQPIAAANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNAITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLKPEFVEIIEATK
1TSI Chain:A ((2-250))
--SKPQPIAAANWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAIAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVRGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIKATQ
General information:
TITO was launched using:
RESULT:
Template:
1TSI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -195548 for 2139 contacts (-91.4/contact) +
2D Compatibility (PS) -27208 + (NN) -9008 + (LL) 352
1D Compatibility (HY) -29200 + (ID) 9150
Total energy: -269762.0 ( -126.12 by residue)
QMean score : 0.763
(partial model without unconserved sides chains):
PDB file :
Tito_1TSI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TSI-query.scw
PDB file :
Tito_Scwrl_1TSI.pdb
: