Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPIPNNPGAGENAFDPVFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCND-QSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKATSL
1YFZ Chain:A ((27-202))---------------------------------SPM-EDIEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAID-----------L-PLSIDFLAVSSYGSSTKSSGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERREADVKVDYCGFKIPDKFVVGYGLDYAEKYRNLPFIGVLKPE----------


General information:
TITO was launched using:
RESULT:

Template: 1YFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172936 for 1348 contacts (-128.3/contact) +
2D Compatibility (PS) -18834 + (NN) -5349 + (LL) 1484
1D Compatibility (HY) -14400 + (ID) 2650
Total energy: -212685.0 ( -157.78 by residue)
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_1YFZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YFZ-query.scw
PDB file : Tito_Scwrl_1YFZ.pdb: