Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAFLWAQDRDGLIGKDGHLPWHLPDDLHYFRAQTVGKIMVVGRRTYESFPKRP-LPERTNVVLTHQEDYQAQGAVVVHDVAAVFAYAKQHPDQELVIAGGAQIFTAFKDDVDTLLVTRLAGSFEGDTKMIP-LNWDDFTKVSSRTV-EDTNPALTHTYEVWQKKA
3IX9 Chain:A ((25-187))
-IVAIWAQDEEGVIGKDNRLPWYLPAELQHFKETTLNHAILMGRVTFDGMG-RRLLPKRETLILTRNPEEKIDGVATFHDVQSVLDWYSAQ-EKNLYIVGGKQIFQAFEPYLDEVIVTHIHARVEGDTYFPAEFDLSLFETVSSKFYTKDEKNPYDFTIQYRKRKE
General information:
TITO was launched using:
RESULT:
Template:
3IX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98081 for 1168 contacts (-84.0/contact) +
2D Compatibility (PS) -17461 + (NN) -7020 + (LL) 132
1D Compatibility (HY) -14800 + (ID) 2700
Total energy: -139930.0 ( -119.80 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_3IX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IX9-query.scw
PDB file :
Tito_Scwrl_3IX9.pdb
: