Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVVGVDVIHSIEDIYQLPGHVFIFGGQILFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
2W9S Chain:C ((2-158))
-TLSIIVAHDKQRVIGYQNQLPWHLPNDLKHIKQLTTGNTLVMARKTFESIGKPLPNRRNVVLTNQASFHHEGVDVINSLDEIKELSGHVFIFGGQTLYEAMIDQVDDMYITVIDGKFQGDTFFPPYTFEDWEVESSVEGQLDEKNTIPHTFLHLVRR-
General information:
TITO was launched using:
RESULT:
Template:
2W9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117397 for 1163 contacts (-100.9/contact) +
2D Compatibility (PS) -16381 + (NN) -2025 + (LL) 272
1D Compatibility (HY) -20800 + (ID) 6250
Total energy: -162581.0 ( -139.79 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_2W9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W9S-query.scw
PDB file :
Tito_Scwrl_2W9S.pdb
: