Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLFSALLLEVIWILAADGGQHWTYEGPHGQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLDLHNNGHTVQLSLPST---LYL--GGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFSTEEEPSKLLVQNYRALQPLNQRMVFASFIQAGSSYTTGEMLSLGVGILVGCLCLLLAVYFIARKIRKKRLENRKSVVFTSAQATTEA |
1KEQ Chain:A ((4-241)) | -----------------------------------------GTRQSPINIQWKDSVYDPQLAPLRVSYDAAS---CRYLWNTGYAFQVEFDDSCEDSGISGGPLGNHYRLKQFHFHWGATDE-WGSEHAVDGHTYPAELHLVHWNSTKYENCKKASVGENGLAVIGVFLKLG-AHHQALQKLVDVLPEVRHKDTQVAMGPFDPSCLMPAC-RDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSMFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKLRSSFRL--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103368 for 1923 contacts (-53.8/contact) +
2D Compatibility (PS) -25730 + (NN) -19128 + (LL) 7356
1D Compatibility (HY) -16800 + (ID) 4200
Total energy: -161870.0 ( -84.18 by residue)
QMean score : 0.305
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