Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESSFSFGVILAVLASLIIATNTLVAVAVLLLIHKNDG---VSLCFTLNLAVADTLIGVAISGLLT-DQLSSPSRPTQK-TLCSLRMAFVTSSAAASVLTVMLITFDRYLAIKQPFRYLKIMSGFVAGACIAGLWLVSYLIGFLPLGIPMFQQT-AYK------GQCSFFAVFHPHFVLTLSCVGFFPAMLLFVFFYCDMLKIASMHSQQIRKMEHAGA--------------------------------------------------------------------------------------------------------------------------------MA--------------GGYRSPRTPSDFKALRTVSVLIGSFALSWTPFLITGIVQVACQECHLYLVLERYLWLLGVGNSLLNPLIYAYWQKEVRLQLYHMALGVKKVLTSFLLFLSARNCGPERPRESSCHIVTISSSEFDG |
| 2RH1 Chain:A ((41-477)) | ----VGMGIVMSLIVLAIVFGNVLVIT----AIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL--MKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFF-TNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLN-WIGYVNSGFNPLIYC-RSPDFRIAFQELLCL--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230018 for 2103 contacts (-109.4/contact) +
2D Compatibility (PS) -29115 + (NN) -15278 + (LL) 3580
1D Compatibility (HY) -28000 + (ID) 3650
Total energy: -302481.0 ( -143.83 by residue)
QMean score : 0.322
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