Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSRSVCEK--MTMTTENPNQTVVSHFFLEGLR--------YTAKHSSLFFLLFLLIYSI----TVAGNLLILLTVG--SDSHLSLPMYHFLGHLSFLDACLSTVTV-------PKVMAGLL--TLDGKVISFEGCAVQLYCFHFLASTECF-------------------------LYTVMAYDRYLAICQPLHYPVAMNRRMCAEMAG---ITWAIGATHAAIHTSLTFRLLYCGPCHIAYFFC-------------------------------------------------------DIPPVLKLACTDTTINELVMLASIGIVAAGCLILIVISYIFIVAAVLRIRTAQGRQRAFSPCTAQLTGVLLYYVPPVCIYLQPRSSEAGAGA----PAVFYTIVTPMLNPFIYTLR----NKEVKHALQRLLCSSFRESTAGSPPP--------------------- |
4AN8 Chain:A ((8-500)) | LEKFNLIDEPWIPVLKGGRVVEVGIGEALLRAHEFARIETPSPLEEAVLHRLLLAVLHRALSGPRCPEDVLDWWRKGGFPQDPIRDYLNRFRDRFFLFHPEAPFLQVADLPEENPLPWSKLLPELANLPKATYAQAARALLVHQAFAPGGLLRRYGVGSAKDAPVARPALFLPTGQNLLETLLLNLVPYTPEDDAPIWEVPPLRLGDLEGARTKWPLTGRTRVYTWPARGVRLLDEGDGVRFMGYGPGVEPLEATHRDPMVAQRLDAKGNLLVLRLSEERSFWRDFSAMLPRQGGKVAATLEHAENLQGELEDEGLEGRITLRVLGQVSDQAKVLDIRREVYPLPSGLLTPKAEENLEKALKMAEELGQGLKHLAQEVAKAVVYLEELTKLANSLPLERLYWHALDGAFPRFFARVEEEASLDLWREALRGAALEAWKATRRFLGTGARHLKALAQGEQEFGRLLGEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -307960 for 2287 contacts (-134.7/contact) +
2D Compatibility (PS) -33552 + (NN) 5517 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: -342645.0 ( -149.82 by residue)
QMean score : 0.171
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