Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------MWPNITAAPFLLTGFPGLEAAHHWISIPFFAVYVCILLGNGMLLYLIKHDHSLHEPMYYFLTMLAGTDLMVTLTTMPTVMGILWVNHREISSVGCFLQAYFIHSLSVVESGSLLAMAYDCFIAIRNPLRYASILTNTRVIALGVGVFLRGFVSILPVILRL-FSFSYCKSHVITRAFCLHQEIMRLACADITFNRLYP--VILISLTIFLDCLIILFSYILI-LNTVIGIASGEERAKALNTCISHIS--CVLIFYVTVMGLTFIYRFGKNVPEVVHIIMSYIYFLFPPLMNPVIYSIKTKQIQYGIIRLLSKHRFSS |
| 4ONQ Chain:A ((7-353)) | RLPKPMIGFGVPTEPLPAMVRRTLPSQAVGPPFFYYENVALAPKGVWDTISSSLYDIE--PEFVDSKYFCAAARKRGYIHNLPVENRFPLFPLAPRTIHEALPLSKKWWPSWDPRTKLNCLQTAIGSAQLTNRIRKAVEDFDGEP---PMRVQKFVLDQCRKWNLVWVGRNKVAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQ-------VDTVAYHLSVLK---------DLFPGGINVLSLFSGIGGGEVALYRLGIPLNTVVSVEKSEVNRDIVRSWWEQTNQRGNLIHFNDVQQL--------NGDRLEQLIESFGGF------DLVIGGSPSLFSSYVRILDLVKSIMS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ONQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -312752 for 2145 contacts (-145.8/contact) +
2D Compatibility (PS) -28432 + (NN) 5060 + (LL) 2704
1D Compatibility (HY) -3200 + (ID) 2400
Total energy: -339020.0 ( -158.05 by residue)
QMean score : 0.249
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