Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | M------------------LPSNITSTHPAVFLLVGIPGLEHLHAWISIPFCFAYTLALLGNCTLLFIIQADAALHEPMYLFLAMLATIDLVLSSTTLPKM----LAIFWFRDQEI--NFFACLVQMFFLH----SFSIMESAVLLAMAFDRYVAI-------------CKPLHYTTVLTGSLITKIGMAAVARAV---------------TLMTPLPFLLRRFHYCRGPVIAHCYCEHMAVVRLA--CGDTSFNN---IYGIAVAMFIVVLDLLFVILSY---VFILQAVLQLASQEARYKAFGTCVSHIGAILSTYTPVVISSVMHR--VARHAAPRVHILLAIFYLLFPPMVNPIIYGVK--TKQIREYVLSLFQRKNM------ |
| 3ES5 Chain:A ((42-420)) | MRLGWIDPLPQVDTIFPLGLEPNVESI-PAGEVELDF----NLPETIAKPF--ADTVTSVGDRIQL-VDDDKENIATSIYGLSFFKAARQLYSTMLDHEKAVNQPLKAVYYDETPIPAHMSGALGIIGHMKTKVGDVLVKDAGVLFKRGTAAGVTKFSEIDNDKTWNLDCSKLVWADHSSLSMIKRLASEKISQLVKQRYRVTDAQGHVYSVSMPQLTDQALPDYYDSIPDVAP-NSDQLRVLTAALQMSLAQFRNDELPHDEDRSDLLTTLDLLYADGAYEISALRDQFELLMARYTTDFKWRVESIFKVGPPPAGTTGYGAQTVSSTGNTARWQFPLSDADINIGYLFSPSKSFSLFPKMVGYSKRAREDASASFANSDAKKFYAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ES5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -353911 for 2298 contacts (-154.0/contact) +
2D Compatibility (PS) -32044 + (NN) -9825 + (LL) 388
1D Compatibility (HY) 800 + (ID) 3050
Total energy: -397642.0 ( -173.04 by residue)
QMean score : 0.254
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