Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MNLDSFFSFLLKSLIMALSNSSWRLPQPSFFLVGIPGLEESQHWIALPLGILYLLALVGNVTILFIIWMDPSLHQSMYLFLSMLAAIDLVVASSTAPKALA-VLLV-RAQEIGYTVCLIQMFFTHAFSSMESGVLVAMALDRY-----VAICHPLHHSTILHPGVIGHIG--MVVLVRGLLLLIPFLILLRKLIFCQATIIGHAYCEHMAVVKLACSETTVNRAY----GLTVALLVVGLDVLAIGVSY---AHILQAVLKVPGNEARLK-AFSTC-GSHVCVIL----VFYIPGMFSF-LTHRFGHHVPHHVHVLLA------ILYRLVPPALNPLVYRVKTQKIHQ |
| 4UY5 Chain:A ((2-327)) | TLSLANYLAADSAAEALRRDVRAGLTAAPKSLP---------------PKWFYDAVGSDLFDQITRLPEYYPTRTEAQILRTRSAEIIAAAGADTLVELGSGTSEKTRMLLDAMRDAE------LLRRFIPFDVDAGVLRSAGAAIGAEYPGIEIDAVCGDFEE----HLGKIPHVGRRLVVFLGSTIGNLTPAPRAEFLSTLADTLQPGD--SLLLGTDLVKDTGRLVRAYDDAAGVTAAFNRNVLAVVNRELSADFDLDAFEHVAKWNSDEERIEMWLRARTAQHVRVAALDLEVDFAAG--EEMLTEVSCKFRPENVVAELAEAGLRQTHWWTDPAGDFGLSLAVRLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -315574 for 2164 contacts (-145.8/contact) +
2D Compatibility (PS) -31242 + (NN) -9664 + (LL) 1976
1D Compatibility (HY) 4400 + (ID) 3000
Total energy: -353104.0 ( -163.17 by residue)
QMean score : 0.200
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