Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFLNGTSLTPASFILNG-IPGLEDVHL--WISFPLCTMYSIAITGNFGLMYLIYCDEALHRPMYVFLAL-L-------------SFTDVLMCTSTL-PN------------------TLFILW-FNLKEIDFKACLAQ---MFFVHTFTGMESGVLMLMALDHC-------VAICFPLRYAT--ILTNSVIAKAG--FLTFLRGVMLVIPSTF-LTKRLPYCKGNVIPHTYCDHMSVAKIS---C-GNVRVNAIYGLIVALLI-GGFDILCITISYTMILQAVVSLSSADARQKAFSTCTA--HFCAIVLTYVPAFFTFFTHHFGGHTIPLHIHIIMANLYLLM---PPTMN-PIVYGVKTRQVRESVIRFFLKGKDNSHNF---- |
| 1P9R Chain:A ((10-410)) | -DFFSLAEEAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISLAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMV--------GEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -309901 for 2244 contacts (-138.1/contact) +
2D Compatibility (PS) -32654 + (NN) -2542 + (LL) 672
1D Compatibility (HY) -1600 + (ID) 2050
Total energy: -348075.0 ( -155.11 by residue)
QMean score : 0.109
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