Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MEEENATLLTEFVL----TGFLYQPQWKIPLFLAFLVIYLITIMGNLGLIAVIWKDPHLHIPMYLLL--GNLAFVDAWISSTVTPKMLNNFLAKSKMISL--------SECKIQFFSIAIGVTTECFLLATMAYDRYVAICKPLLYPAIMTN-------------GLCIRLLILSYIA---GILHALIHEGFLFRLTFCNSNIVHHIYC--DTIPLSKISCTDSSINFLMVFIFSGSIQVFSIVTILISYTFVLFTV-LEKKSDKGVRKAFSTC----GAHLFSVCLYYGPLL-------LMYVGPASPQADGQNMVEPLFYTVIIPLLNPIIYSLRNKQVIVSFIKMLKRNVKVSY---- |
| 4L8T Chain:A ((64-447)) | EYLGMLQYKREDEAKLIQNLILDLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSTINGIKQVVKEHLEDFEMLSFWLSNTC--HFLNCLKQYSGEEEFMKHNSPQQNKNCLNNFDL-SEYRQILSDVAIRIYHQFIIIMEKNIQPIIVPGMLEYESLQGYTMTSVLQQLSYFYTTMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFEKRVTPSFVRKVQALLNSREDSSQLMLDT--KYLFQVTFPFTPSPHALEMIQ-IPSSFKLGFLNRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290585 for 2195 contacts (-132.4/contact) +
2D Compatibility (PS) -30543 + (NN) -1431 + (LL) 672
1D Compatibility (HY) -17200 + (ID) 1950
Total energy: -341037.0 ( -155.37 by residue)
QMean score : 0.160
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