Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENYNQTSTDFILLGLFPPSRIDLFFFILIVFIFLMALIGNLSMILLIFLDTHLHTPMYFLLSQLSLIDLNYISTIVPKMASDFLHGNKSISFTGCGIQSFFFLALGGAEALLLASMAYDRYIAICFPLHYLIRMSKRVCVLMITGSWIIGSINACAHTVYV--------------------LHIPYCRSRAINHFFCDVPAMVTLACMDTWVYEGTVFLSATIFLVFPFI-------------------GISCSYGQVLFAVYHMKSAEGRKKAYLTCSTHLTVVTFYYAPF----VYTYLRPRSLRSPTEDKVLAVFYTILTPMLNPI-IYSLRNKEVMGALTRVSQRICSVKM |
4XNV Chain:A ((38-382)) | SFKCALTKTGF----------QFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP-KSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196977 for 2121 contacts (-92.9/contact) +
2D Compatibility (PS) -29981 + (NN) -1426 + (LL) 1152
1D Compatibility (HY) -22400 + (ID) 2650
Total energy: -252282.0 ( -118.94 by residue)
QMean score : 0.149
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