Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENQNNVTEFILLGLTENLELWKIFSAVFLVMYVATVLENLLIVVTIITSQSLRSPMYFFLTFLSLLDVMFSSVVAPKVIVDTLSKSTTISLKGCLTQLFV--EHFFGGVGIILLTVMAYDRYVAICKPLHYTIIMSPRVCCLMVGGA---------WVGGFMHAMIQLLFMYQI-------PFCGPNIIDHFI--CDLFQLLTLACTDTHILGLL------VTLNSGMMCVAIFLILIASYT-------VILCS--LKSYSSKGRHK----ALSTCSS--HLTVVVLFFVPCIFLYMRPVVTHPIDKAMAV-SDSIITPMLNPLIYTLRNAEV---KSAMKKLWMKWEALAGK- |
| 3NVT Chain:A ((32-381)) | -ELRTQVDQLNIDLLELISKRANLVQEIGKIKGRFDPLREREMLNTILAANEGPFE---DSTVQKLFKEIFKAGLELQEEDHSKALLVSRKNKKEDTIVTVKGLPIGNGEPVFVFGPCSVESYEQVAAVAESIKAKGLK---LIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVD---VTHSTGRKDLLLPCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAILASNLVP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272339 for 2099 contacts (-129.7/contact) +
2D Compatibility (PS) -31993 + (NN) -10721 + (LL) 1400
1D Compatibility (HY) -2000 + (ID) 2300
Total energy: -317953.0 ( -151.48 by residue)
QMean score : 0.152
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