Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MEKINNVTEFIFWGLSQSPEIEKVCFVVFSFFYIIILLGNLLIMLTVCLSN-----LFKSPMYFFLSFLSFV------DICYSSVTAPKMIVDLLAKDKTISYVGCMLQLFGVHFFGCT---EIFILTVMAYDRYVAICKPLHYMTIMNRETCNKMLL-----------GTWVGGFLHSIIQVALVVQLPF-CGPNEIDHYFCDV---HPVLKLACTETYIVGVVVTANSGT---IALGSFVILLISYSIILVSLRKQSAEGRRKALSTCGS---HIAMVVIFFGPCT--FMYMRPDTTFSEDKMVAVFYTIITPMLNPLIYTLRNAEV-KNAMKKLWGRNVFLEAKGK |
| 4RNZ Chain:A ((1-369)) | MERLVWDKLTLLGFLEK-NHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIIKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGHYYDSKAQEVAGFLLETPVKYTRISSPFSYGRFHRPHYGVDYAAKHGSLIHSASDGRVGFMGVKAGYGKVVEIHLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVGSTGPHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQRSKQKLEELLKTHSFEKNSFYLLEG---FLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -287815 for 2126 contacts (-135.4/contact) +
2D Compatibility (PS) -32322 + (NN) 4739 + (LL) 416
1D Compatibility (HY) -4000 + (ID) 3300
Total energy: -322282.0 ( -151.59 by residue)
QMean score : 0.123
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