Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MTEFIFLVLSPNQEVQRVCFVIFLFL-------YTAIVLGNFLIVLTVMTSRSLGSPMYFFL-SYLSFMEICYSSATAPKLISDLLAE----RKVISWWGCMAQLFFLHFFGGTEIFLLTVMAYDHYVAICKPLSYTTIMN--WQVCTVLVGIA---WVGGFMHSFAQILLIFHLLFCGPNVINHYFCDLVPLLKLACS---DTFLIGLLIVANGGTLSVISF----GVLLASYMVILLHLRTWSSEGWCKALSTCG-------------SHFAVVILFFGPCVFNSLRPSTTLPIDKMVAVFYTVITAILNPVIYSLRNAEMRKAMKRL---WIRTLRLNEK---- |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRDPANKAVAYSIIASTLAIME---YEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKL--HVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSGVMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELG----NLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -342098 for 2256 contacts (-151.6/contact) +
2D Compatibility (PS) -29995 + (NN) -9168 + (LL) 780
1D Compatibility (HY) -5200 + (ID) 2350
Total energy: -388031.0 ( -172.00 by residue)
QMean score : 0.334
|
|
|