Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MSNEDMEQDNTTLLTEFVLTGLTYQPEWKMPLFLVFLVIYLIT-------IVWNLGLIALIWNDPQLHIPMYFFLGSLAFVDAWISSTVTPKMLVNFLAKNRMIS-LSECMIQFFSFAFGGTTEC---FLLATMAYDRYVAICKPLLYPVIMNNSLCIRLLAFSFLGGFLHALIHEVLIFRLTFCNSNIIHHFYCDIIPLFMISCTDPSINFLMVFILSGSIQVFTIVTVLNSYTFALFTILKKKSVRGVRKAFSTCG---------AHLLSVSLYYGPL--IFMYLRPASPQADDQDMIDSVFYTII----IPLLNPIIYSLRNKQVIDSFTKMVKRNV |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRDPANKAVAYSIIASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKT--VYDVGLPQIRAALLKGKNHYALAIIKKKYSGVMRLIGELEVA----LWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343028 for 2442 contacts (-140.5/contact) +
2D Compatibility (PS) -31548 + (NN) -7345 + (LL) 160
1D Compatibility (HY) -9200 + (ID) 1800
Total energy: -392761.0 ( -160.84 by residue)
QMean score : 0.299
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