Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYSIYKSTVNIPLSHGVVHSFCHNMNCNFMHIFKFVLDFNMKNVTEVTLFVLKGFTDNLELQTIFFFLFLAIYLFTLMGNLGLILVVIRDSQLHKPMYYFLSMLSSVDACYSSVITPN-MLVDFTTKNKVISFLGCVAQVFLACSF---GTTECFLLAAMAYDRYVAIY-----NPLLYSVSMS-PRVYMPLINASYVAGILHATIHTVATFSLSFCGANEIRRVFCDIPPLLAISYSDTHTNQLLLFYFVGSIELVTILIVLISYGLILLAILKMYSAEGRRKVFSTCGAHLTGVSIYYGTILFMYVRPSSSYASDHDMIVSIFYTIVIPLLNPVIYSLRNKDVKDSMKKMFGKNQVINKVYFHTKK-------------------- |
| 4FHL Chain:A ((2-392)) | GSMTLSSNQYQLPLNVRPYTTTWCSQSPSCSNLLAIGHD------TGITIYCASEESTGLTLQELFTIQ-------TGLPTLHLSFSSSCSYSENSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLTELVKN-----PWLLTLNTLPLVNSSLANVRWIGS------------DGSGILAMCK-SGAWLRWNLFKNLLPNVQGISLF----------PSLLGACPHPRYMDYFATAHSQHG---LIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLMGFT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FHL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -302021 for 2485 contacts (-121.5/contact) +
2D Compatibility (PS) -33456 + (NN) -2249 + (LL) 5112
1D Compatibility (HY) -10800 + (ID) 2900
Total energy: -346314.0 ( -139.36 by residue)
QMean score : 0.143
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