Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MAKNNLTRVTEF--ILMGFMDHP--------KLEIPLFLVFLSFYLVTLLGN-------------------VGMIMLIQ-----VD-VKLYTPM------YFFLS--HLSLLDACYTSVITPQILATLATGKTV-------ISYGHCAAQFFLFTICAGTE--CFLLAV---MAYDRYAAIRNPLLYTVAMNPRLCWSLVVGAYVCGV---SGAILRTTCTFTLSFCKDNQIN--------------FFFCDLPPLLKLACSDTANIEIVIIFFG---NFVILANASVILISYLLIIKTILKVKSSGGRAKTFSTC----------------ASHITAVALFF---GALIFMYLQSGSGKSLEEDKV-----VSVFYTVVIPMLNPLIYSLRNKDVKDAFRKVA------RRLQVSLSM---------- |
| 4R5O Chain:A ((2-427)) | DDCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSCIIKNKYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDT-EKKTAYQDCYASLNAGKTLGIGNYDSANIIHSNGKFYLLVGTSTSNRDHFYIVDAKTLYYENSAVVGANLSGLTILNEQ--YGLVTGDGIRRIDLKSLNNVRIKNERLLCFYNSIIYNGKVLSNDTYKDESKVKYYDVNELIAAKEGEAPAVTELDIIQKQKINFVLAKDGNVYTLESADNGCNIVKIKNDFTLEKVFANFQPAKGPYHSSPTIGMVASETENIIYLVSTDGAIYKYIL--GDSDSLKAPFIAAESGVSITAPLQLNQQSGELYVTYTEERKDESKIVVYSKDGKVLHTVDCGESVPSQILFNN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R5O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -309855 for 2013 contacts (-153.9/contact) +
2D Compatibility (PS) -33520 + (NN) 6795 + (LL) 380
1D Compatibility (HY) -14400 + (ID) 3050
Total energy: -353650.0 ( -175.68 by residue)
QMean score : 0.165
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