Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGQELCAKTVQPGCSCYHCSEGGEAHSCRRSQPETTEAAFKLTDLKEASCSMTSFHPRGLQAARAQKFKSKRPRSNSDCFQEEDLRQGFQWRKSLPFGAASSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMNAEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMSQHP-GGLHPHNVRLFMFQLLRGLAYIHHQHVLHRDLKPQNLLISHLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDALLGATEYSSELDIWGAGCIFIEMFQGQPLFPGVSNILEQLEKIWEVLGVPTEDTWPGVSKLPNYNPEWFPLPTPRSLHVVWNRLGRVPEAEDLASQMLKGFPRDRVSAQEALVHDYFSALPSQLYQLPDEESLFTVSGVRLKPEMCDLLASYQKGHHPAQFSKCW
5D1J Chain:A ((3-286))-----------------------------------------------------------------------------------------------------NFQKVEKIGE--YGVVYKARNKLTGEVVALKKIR-------------EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF-----------------VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYKPS-FPKWARQDFSKVVPPLDE--DGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5D1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167203 for 1906 contacts (-87.7/contact) +
2D Compatibility (PS) -27184 + (NN) -12565 + (LL) 10052
1D Compatibility (HY) -28400 + (ID) 6150
Total energy: -231450.0 ( -121.43 by residue)
QMean score : 0.444

(partial model without unconserved sides chains):
PDB file : Tito_5D1J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D1J-query.scw
PDB file : Tito_Scwrl_5D1J.pdb: