Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSAAECKQERKILVNACKAVITRKPPTPYCCERLRVTHVSCVCPVITPQLAALIDVNYAIKVIQGCGIQVPRHSKCGSITTP
M047 Chain:A ((2-125))
QSAAECKQERKILVNACKAVITRKPPTPYCCERLRVTHVSCVCPVITPQLAALIDVNYAIKVIQGCGIQVPRHSKCGSITTP
General information:
TITO was launched using:
RESULT:
Template:
M047.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10571 for 557 contacts (-19.0/contact) +
2D Compatibility (PS) -7751 + (NN) 2029 + (LL) 0
1D Compatibility (HY) 4400 + (ID) 250
Total energy: -12143.0 ( -21.80 by residue)
QMean score : -0.080
(partial model without unconserved sides chains):
PDB file :
Tito_M047.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M047-query.scw
PDB file :
Tito_Scwrl_M047.pdb
: