Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYSAVIVKPKRNVFAVLDIG--TTKI-ICLIVKVSGNFNYKITGTGYKIAEGINGGLITDIKYASYSISSTIGLAEQVSEETIDQIYVNIAGCGILSFNVHNEII---AANHEISDRDI-KRVIFQTFEKYIEENVIIHNIP------LRYHLDDMTDIRE------V-SGLYGKRLSAD-VN-VVTASRPALTNI------ENCITN-------------------------NSGISMAGCIASAYSAGFACLSEDEKELGTAIVDIGGGCTAI-GIF----KRSKLIYANSIPI-----GGVHITRDI-AYGLCTSIEH-------AERIKILYGSTVVTS---------IDENE-YITVQSNEND-EQARIP-KSELVDIIRPRIEEILELVKEQFRKQKD-PINKVVITGGTSRLASMKEIASYIFNKQVRIGCPESYGGLDGEYNK-NPVFSAAIGSIKLIVDTFYKNNPDMLGQDGKISKLYHWVKSKVTV |
| 2CGL Chain:A ((2-480)) | ---------TFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCA-AGIAIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTASAVIASPLN----GSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPALIAATQALPACRFIINPNDDRFINPDEMCSEIQAACREMAQPIPESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVALIHS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164692 for 3237 contacts (-50.9/contact) +
2D Compatibility (PS) -41747 + (NN) -7366 + (LL) 2068
1D Compatibility (HY) -6400 + (ID) 2650
Total energy: -220787.0 ( -68.21 by residue)
QMean score : 0.297
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