Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFIDEVKLYLKAGDGGDGCVSFRREKFVEFGGPNGGNGGKGGNIVFVSDANLNTLLNFRYRRHVKAGSGKSGASRDRSGTAGKNIVLKVPVGTQIIDEESEKIILDFNKPDMEFLIAQGGKGGLGNTNFKSSINRAPRHFTCGQFGEEKYVVLKLKVLSDVGIIGMPNAGKSKFLTRCSNADTKVGDYPFTTIKPHLGVAKVDNSEVVIVDIPGIITDAHLGIGLGHKFLKHVERCKILLHLIDVTHDNVVSAYNCMRNELELYNSDLVKKEEIIVLNKCDLLRKVEIFEKKNHLANYLNKEVLCLSI--GEDLQPILRLLNEKLKKGSSKKVDVYDPFKR |
| 2DYK Chain:A ((2-160)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------HKVVIVGRPNVGKSSLFNRLLKKRS----------DLKEGVVETDRGRFLLVDTGGLWSGDKWEKKIQEKVDRALEDAEVVLFAVDGRAE-LTQADYEVAEYLRR-----KGKPVILVATKVDDPKHELYLGPLYG---LGFGDPIPTSSEHARGLEELLEAIWERLP--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102366 for 1148 contacts (-89.2/contact) +
2D Compatibility (PS) -15382 + (NN) -1324 + (LL) 7396
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -118426.0 ( -103.16 by residue)
QMean score : 0.498
|
|
|