Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVVLSGYGLNCEKETAFAFVECGRKLGVNNIEVRIVHINEIIKNPGELRLSNILAIPGGFSYGDDTGAGNAFALRVKNNLLDKFQEFLSQDKLVIGICNGCQILAKLIPEFS---NLA-----LIRND-IGNYQCRWIKVKVSPQSSSVWLQDL-NELYLPIAHGEGKFFMNQGVLDQLIENNSVALRYINESGDYANLQFPYNPNGSTYDLAALSDKSGRVLALMPHPERGIFFTQQDNWPLEKEKCKRLKIAMPKYGDGMLIFENALRYFC |
| 1GPW Chain:B ((1-184)) | MRIGIISV-GPGNIMNLYRGVKRASEN-------FEDVSIELVE--SPRNDLYDLLFIPGVGHFGEGMRR------LRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLSLIEGNVVKLRSRRLPHMGWNEVI---------FKDTFPNGYYYFVHTYRAV-----------CEEEHVLGTTEY-------------DGE---IFPSAVRKGRILGFQFHPEKSSKIGRKLLEKVIECSLSR----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66305 for 1368 contacts (-48.5/contact) +
2D Compatibility (PS) -18790 + (NN) -7149 + (LL) 4016
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -96028.0 ( -70.20 by residue)
QMean score : 0.319
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