Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVSSDTELIKSTIMSIIDQNKGRDIVTFDVQNK----TIIAKYMIIASGDSSRHVKALAEHVMKSLKQYYKMDVEGMDEGNWVILNFQGIMVHIFRPEVREYYKIEELWN
2HQL Chain:A ((1-104))
MLNRVFLEGEIESSCWS---VKKTGFLVTIKQMRFFGERLFTDYYVIYANG---QLAYELEKHTKKYKTISIEGILRTYLERKSEIWKTTIEIVKIFNPKNEIVIDYKEI--
General information:
TITO was launched using:
RESULT:
Template:
2HQL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20791 for 618 contacts (-33.6/contact) +
2D Compatibility (PS) -10351 + (NN) 1030 + (LL) 276
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -35336.0 ( -57.18 by residue)
QMean score : 0.179
(partial model without unconserved sides chains):
PDB file :
Tito_2HQL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HQL-query.scw
PDB file :
Tito_Scwrl_2HQL.pdb
: