Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------MDIENNLQDLKRKFNYIERKLENPTNLSQKEFINLSKEYSEL----RPIIKIINEYDTLKKEILDL---------EEIIKDENSEYDIKELAKEEFFEKQKV-LLPQVKAKLKLALLPKDEDDSRNAILEIRAGTGG----EEAALFAAMLFRMYQKYAERR------------NWKFEPISISSTGIGGYKEASALINGTEV------FARL---KFESGVHRVQRVPETESSGR--------------------LHTSAATVAILPE-------------VEEVDFKIEEKDLRIDVY-RSSGPGGQSVNTTD---SAVRVTHLPTEM-----VVIQQDEKSQHK-NKAKALKVLRARLYEIERQKKEIERSTMRKSQIGSGDRSERIRTYN--------FPQSRITDHRINLTSHQLEQIIKEGELDEFI-----------EVLISRNEAER--LAGES- |
| 4TWA Chain:A ((3-497)) | MAITSKKIENFSDWYTQVIVKSELIEYYDISGCYILRPAAYYIWECVQAFFNKEIKK-LNVENSYFPLFVTKNKLEKEKNHIEGFSPEVAWVTKYGDSNLPEEIAIRPTSETIMYSVFPKWIRSYRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWYEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFISENGRAIQAATSHYLGTNFAKMFKIEFEDENEVKQYVHQTSWGCTTRSIGIMIMTHGDDKGLVLPPNVSKYKVVIVPIFYKTTDENAIHSYCKDIEKILKNAQINCVYDDRASYSPGYKFNHWELRGIPIRIEVGPKDLQNNSCVIVRRDNNEKCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDSIVQVTSFSEVMNALNKKKMVLAPWCEDIATEEEIKKETQRLSLTLSGAMKPLCIPLDQPPMPPNMKCFWSGKPAKRWCLFGRSY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 54108 for 2455 contacts (22.0/contact) +
2D Compatibility (PS) -37479 + (NN) -3411 + (LL) 132
1D Compatibility (HY) -15200 + (ID) 3350
Total energy: -5200.0 ( -2.12 by residue)
QMean score : 0.241
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