Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRIPFLLILIIVIASLPVINNWLSYHNQTLNDDYIGERLDNYISRNFDKIIKILREESIKSNYAARDNATKGKILQYENKIFDLAYPYLGNENS-NIIAVGFFDYSCGYCKAIKDDIK---QLI-NDG-KIKYIFRDTPILGN---NSLKAAKSALAVYFIDKGKYFDFHYAILDHKGEFSDENILDIVKSIGINEDNFNNSMKNNAGKIEQMINDSKFLVRELGAGGTPFLIIGDSLFIGAT--D-------LDVLRKKVDELSHKQN |
| 3L9S Chain:A ((6-187)) | -----------------------------------------------------------------------------------GKQYITLDKPVAGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVEFLGPLGKELTQAWAVAMALGVE-DKVTVPLFEAVQKTQTVQSAADIRKVFVDAGVKGEDYDAAW--NSFVVKSLVAQQEKAAADLQLQGVPAMFVNGKYQINPQGMDTSSMDVFVQQYADTVKYLVDK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3L9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -63165 for 1215 contacts (-52.0/contact) +
2D Compatibility (PS) -17987 + (NN) -11247 + (LL) 6364
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -93285.0 ( -76.78 by residue)
QMean score : 0.494
|
|
|