Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYFLRIDNVRVVGIDVEIKKQSSVCEQMRFRIGRTSLLSTLSRVSGVVERRNAIDILACINIKAQHGSIKLMATDLDISIFASLAADVLTE-GEVKVSAHTLHDIVKKLPADLDVNFEVNDQGKLLISYGNANFSLPNVVLNKLPVLEEGDHKYDFTLLNTDLIDLLNKTKFAVSLDDTRYNLNGIYLHTDEQFLYCVATDGHRLSCVKKPKPQNINSEFGVIIPRKTVIELLKVLDDCD-EINIKLSDRKIKFTCGKYIIISKLIDGAFPDYKCVIPASQDKQMVVESSKLASVIDRVSVVVSDRIKSIEFSLQEKSLTLHSNSQECSDATEFIEVDYNGAPIEIGFNSRYLLDALSCIK-SKCKFSLSDSSSATVITDENDPNVLYIVMPVRT |
| 4OVF Chain:A ((1-364)) | ----------------------------MKFTVEREHLLKPLQQVSGP----PTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE-RMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPSH-SVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPM-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271821 for 2849 contacts (-95.4/contact) +
2D Compatibility (PS) -38742 + (NN) -12519 + (LL) 3224
1D Compatibility (HY) -31200 + (ID) 5900
Total energy: -356958.0 ( -125.29 by residue)
QMean score : 0.543
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