Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTRFAPSPTGYLHVGNARTALVCWMYTRSQNGKFLLRFDDTDLQRSDVKHIDSIVQDLRWICIDWDV---------IFKQSERFKHYNEVFLQLITKGHIYACYETKEELDIKRKLQLKHGLPPVYDRSALLLTEQEKFCYEQEGRKPHFRFKLDRNEVVKWNDEVKGEINIATSSISDPVVKREDGIYTYMLPSVIDDVDFNVTHVIRGEDHVTNTAVQIQMIQAL---EA--KVPVFAHLPLLHFDDS-KISKRKGGLDIKSIKENEIEPMALASYLIKLGTSDPI-EAYVNMQSLIDSFDIKKFGSASAQFNLSEIHKLNSKVLQQMPFEMVKERL----SQ-------IGVNSPEFWYFIRNNIEKFSEVAEWWQICKSNIEPV-V---------LDKEFIKIVLDALP-QGDCNENTLSEWVKA-IQQTVDIKLKDLFMQLRLALTGAKTGPELAKLLIFIGKENIIARLKKY |
| 2JA2 Chain:A ((7-483)) | VRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGTFVFRIEDTDAQRDSEESYLALLDALRWLGLDWDEGPEVGGPYGPYRQSQRAEIYRDVLARLLAAGEAYHAFSTPEEVEARHVAAG-RNPKLGYDNFDRHLTDAQRAAYLAEGRQPVVRLRMPD-DDLAWNDLVRGPVTFAAGSVPDFALTRASGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALHQALIRIGVAERIPKFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWSIADDHDLFGLDEMVAAFDVADVNSSPARFDQKKADALNAEHIRMLDVGDFTVRLRDHLDTHGHHIALDEAAFAAAAELVQTRIVVLGDAWELLKFFNDDQYVIDPKAAAKELGPDGAAVLDAALAALTSVTDWTAPLIEAALKDALIEGLALKPRKAFSPIRVAATGTTVSPPLFESLELLGRDRSMQRLRAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233935 for 3380 contacts (-69.2/contact) +
2D Compatibility (PS) -46392 + (NN) -18593 + (LL) -16
1D Compatibility (HY) -16800 + (ID) 6150
Total energy: -321886.0 ( -95.23 by residue)
QMean score : 0.513
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