Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPELPEVEIISNFLFDKIKNKQISGVTVNNWNLRVPITQNIDDVIKGKVINNIKRRGKYIIWHIDNDIVVTVHLGMSGKLIYAKGEQAQNKHDHVIFSFSDNTSIIFNDPRKFGLVIILNKEQEVNFF--NDFGIEPFTDEFNGDYLQKLLKSKKVNIKSALMNNKLIVGIGNIYASESLFRARISPLRSAQDLTYKECEKLATEIKNTLSDAIIAGGSTLKDYAQPSGSVGYFQNSFYVYGKVQKPCKICNNTITLIRQNGRSTYFCNACQN
4CIS Chain:A ((2-271))-PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKIIQGIIRRGKYLIFEIGDDFRLISHLRMEGKYRLATLDAPREKHDHLTMKFSDG-QLIYADVRKFGTWELISTDQVLPYFLNKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKEANQLIESSIHLLHDSIIEILQKAIKLGGSSI---------TGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPFCQQ


General information:
TITO was launched using:
RESULT:

Template: 4CIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140672 for 2092 contacts (-67.2/contact) +
2D Compatibility (PS) -28230 + (NN) -12662 + (LL) 236
1D Compatibility (HY) -17600 + (ID) 4500
Total energy: -203428.0 ( -97.24 by residue)
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_4CIS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CIS-query.scw
PDB file : Tito_Scwrl_4CIS.pdb: