Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELPEVEIISNFLFDKIKNKQISGVTVNNWNLRVPITQNIDDVIKGKVINNIKRRGKYIIWHIDNDIVVTVHLGMSGKLIYAKGEQAQNKHDHVIFSFSDNTSIIFNDPRKFGLVIILNKEQEVNFF--NDFGIEPFTDEFNGDYLQKLLKSKKVNIKSALMNNKLIVGIGNIYASESLFRARISPLRSAQDLTYKECEKLATEIKNTLSDAIIAGGSTLKDYAQPSGSVGYFQNSFYVYGKVQKPCKICNNTITLIRQNGRSTYFCNACQN |
4CIS Chain:A ((2-271)) | -PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKIIQGIIRRGKYLIFEIGDDFRLISHLRMEGKYRLATLDAPREKHDHLTMKFSDG-QLIYADVRKFGTWELISTDQVLPYFLNKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKEANQLIESSIHLLHDSIIEILQKAIKLGGSSI---------TGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPFCQQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140672 for 2092 contacts (-67.2/contact) +
2D Compatibility (PS) -28230 + (NN) -12662 + (LL) 236
1D Compatibility (HY) -17600 + (ID) 4500
Total energy: -203428.0 ( -97.24 by residue)
QMean score : 0.489
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