Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQSILRLLYITAVLTRYNISPYLLSPSRKSINRIRGYKLRCAFEKLGPVFIKFGQSISSRTDILNEDITNNLLLICDKLPSFSHKIAVKTIESEFNCKLSDIFSSFSEKPIAAASISQAHKATTT-EGKEVAVKILRPNIEKTFSKDIKMLFWLAGIVEKFSKQSRRLKPIELVETFAEICRLELDLRFEAAHSSELRENTKNDRGFYVPEVDWSRTSKRVLTLEWIGATPVYEVEKLN------NHKQIAINLIESFCNQVYRDCFFHADMHPGNLMIDS---NNSIVALDCGIMGRIDRETCYYVIEILKGFLNRDYDRVAKVHFRAGYVSPQHKSFVTACRAIGEPIIGQPIQKISFASLLAQLLKITGDFDMKVQTQLLLLQKTMILLEGTCRKIYPE--INVWKVVEAWTENQHKNKISYKERIKSSYPVKTIQEIFNLIEKLNLIANQKLENIQIKDRSNGKIYFLLWSMVIALIVKLLIFL |
| 3I6U Chain:A ((224-486)) | -------------------------------------------------------------------------------------------------------------KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIG----------------------------------------LNVETEIEILKKLN----HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----------------------------PTYLAPEV--L----V----AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQI--TSGKYN-FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSE----------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3I6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -62427 for 1706 contacts (-36.6/contact) +
2D Compatibility (PS) -23751 + (NN) -6385 + (LL) 19552
1D Compatibility (HY) -11200 + (ID) 1600
Total energy: -85811.0 ( -50.30 by residue)
QMean score : 0.316
|
|
|