Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNT-----LKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS |
4DQZ Chain:A ((1-223)) | -----------MILTITYT-----QPPATDLGYLL----------------------------HKNPSRPQTFELN------HGKAHIFYPEATSERCTVALLLDI---DSFMSVAISRVFGTAMSGKCKEKPELAAIKLPLKAKIMMLPCKGG----EEIIYRLFEPLGYKVDVEGYRYYTVSLEGEVRVRDLLNHIYVLIPVLDIDKLFQHGEGWLVDHPEKELIT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74155 for 1236 contacts (-60.0/contact) +
2D Compatibility (PS) -17071 + (NN) 688 + (LL) 5056
1D Compatibility (HY) -9600 + (ID) 1200
Total energy: -96282.0 ( -77.90 by residue)
QMean score : 0.380
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