Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MLTVYGHRGL--PSKAPENTIASFKAA-SEVEGINWLELDVAITKDEQLIIIH---DDYLERTTNMSGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANEY--NMNLNVELKGITGPNGLALSKSMVKQVEEQLTNLN-QNQEVLISSFNVVLVKLAEEIMPQYNRAVIFHT-TSF-REDWRTLLDYCNAKIVN-TEDAKLTKAKVKMVKEAGYELNVW-TV---NKPARANQLANWGVDGIFTDNADKM-VHLSQ |
2O55 Chain:A ((2-255)) | SKVIIPKIVGHRGVGKEGLAPENTLRSFVLCMER--NIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKDGTSRIGDLSLEELKRLDVGGG-------HTIPSLEELFVAIEEQKFNLKLNLELKG---EEWKRKESGDHQRLLLLVEKYHMQER-VDYCSFHHEALAHLKALCPDVKITYLFNYMGQPTPLDFVEQACYGDANGVSMLFHY-LTKEQVCTAHEKGLSVTVWMPWIFDDSEEDWKKCLELQVDLICSNYPFGLMNFLSN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O55.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94770 for 1873 contacts (-50.6/contact) +
2D Compatibility (PS) -25762 + (NN) -10402 + (LL) 796
1D Compatibility (HY) -13600 + (ID) 2650
Total energy: -146388.0 ( -78.16 by residue)
QMean score : 0.483
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