Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYCITKADNGGAQTHLIQLANHFCV-HHDVYVIVGN-HGPMIE------Q-L--DARVNVIILEHLVGPIDFK----QDI-LAVKVLAQLFS--KIKPDVIHLHSSKAGTVGRIAKFISKSKDTRVVFTAHGWAFTEGVK------PA------KK-FLYLVIEKLMSCITDSIICVSDFDK------QLALKY-R-FNRLKLTTIHNGIADVPAVKQTLKSQ---SHNNIGEVVGMLPNKQDLQIN-APTKHQFVMIARFAYPKLPQNLIAAIEILKLHNS---NHAHFTFIGDGPT----------L----NDCQQQVVQAGLENDVTFLGNVINA--SHLL----SQYDTFILISKHEGLPISIIEAMATGLPVIASHVGGISELVAD--NGICMMNNQPETIAKVLEKYLIDSDY-IKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ |
| 2R60 Chain:A ((31-461)) | ----------DFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKG---LPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLE--------RD--LGSERMELPAIIASSRLDQKKNHYGLVEAYVQNK--ELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIAD- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2R60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -187705 for 2771 contacts (-67.7/contact) +
2D Compatibility (PS) -38751 + (NN) -18005 + (LL) 2172
1D Compatibility (HY) -4800 + (ID) 3150
Total energy: -250239.0 ( -90.31 by residue)
QMean score : 0.426
|
|
|