Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKLKLMTIV--------GTRPEIIRLSSTIKACDQYFNQILVHTGQNYDYTLNQIFFDDLELRQPDHYLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILG-DTNSCLAAVSAKRL-KIPVFH-------MEAGNRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGFNKANIFVTGSPMTEVIEAHRDKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKSLMNAINDIAKKY---KMPVIYSTHPRSWKKIEESKFEFDPLVKQLKPFGFFDYNALQK--DAFVVLSDS---GTLSEESSILKFPGVLIRTSTERPEVLDKGT-VIVGGITYNNLIQSVELAREMQNNNEPMIDAIDYKDTNVSTKVV--KIIQSYKDIINRNTWRK----- |
| 3C48 Chain:A ((19-438)) | -SHMRVAMISMHTSPLQQGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPG----ADVELYSPGTERSRRELGIPLHTKVVAFVGR---LQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENVDGETHHG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113964 for 2931 contacts (-38.9/contact) +
2D Compatibility (PS) -39181 + (NN) -6519 + (LL) 892
1D Compatibility (HY) -1600 + (ID) 2400
Total energy: -162772.0 ( -55.53 by residue)
QMean score : 0.265
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