Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLPQNFMWGGALAANQFEGGYEKGGKGLSVIDVMTSGAHGKARQITESIDLNHYYPNHEGIDFYHRYKEDIALFKEMGLKCLRTSIAWTRIFPNGDEDVPNEEGLAFYDRIFDELIAQGIEPVVTLSHFEMPLHLAKHYGGFRNREVVDYFVHFARVVFERYKDKVTYWMTFNEINNQMDTSNPIFLWTNSGVA-LTENDNPEE----VLYQVAHHELLASALAVRLGKEINPKFKIGTMISHVPIYPYSCHPKDMMEAQIANRLRFF--FPDVQVRGYYPSYAKKMLARKGYDVGWQEGDDSILQQGTVDYIGFSYYMSTAVKHDVDTTVENNIVNGGLNHSVENPHIATSDWGWAIDPDGLRYTLNVLYDRYQLP-LFIVENGFGAVDEVV--DGHIHDDYRIEYLKAHITAAIEAVDQDGVDLIGYTPWGIIDIVSFTTGEMKKRYGLIYVDRDNDGHGTMERLKKDSFYWYQQVIASNGDKL |
| 2JAL Chain:B ((25-465)) | VKKFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHY----------NRWKEDIEIIEKLGVKAYRFSISWPRILPEGTGRV-NQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFAL-QLKGGWANREIADWFAEYSRVLFENFGDRVKNWITLNE------------PWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPASEKEEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLE-FAREYLPENYK--DDMSEIQEKIDFVGLNYYSGHLVKFDPDAPAKVSFVERDL------PKTAM---GWEIVPEGIYWILKKVKEEYNPPEVYITENG-AAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAI-QEGVPLKGYFVWSLLDNFEWAEG-YSKRFGIVYVD-----YSTQKRIVKDSGYWYSNVVKNNG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229814 for 3835 contacts (-59.9/contact) +
2D Compatibility (PS) -45750 + (NN) -16793 + (LL) 1004
1D Compatibility (HY) -34400 + (ID) 8100
Total energy: -333853.0 ( -87.05 by residue)
QMean score : 0.503
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